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Avoid empty expectation files

Sergi Blanch Torné requested to merge sergi/ci-collate:bugfix_commit_add_empty into main

The process of adding files to the index to generate the patch was including files that were only touched. The convention is the expectation files only exist if they have content, so collate must exclude them from the patch.

Following the convention of expectation files only present if they have content, if some of those files become empty, include to remove them when preparing the patch.

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